Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946370.1_cds_XP_016488546.1_79170
CDS Infomation

[gene=LOC107808522] [db_xref=GeneID:107808522] [protein=SNF1-related protein kinase catalytic subunit alpha KIN10-like] [protein_id=XP_016488546.1] [location=join(68036..68225,69545..69729,69818..70000,70192..70323,71002..71187,73110..73199,73280..73363,73598..73735,74119..74361,75705..75818)] [gbkey=CDS]
Sequence

ATGGATGGATCAACAGTCCAAAGCAGCAGCAGTGTGGACTCATTTTTACGGAACTATAAG
CTCGGGAAAACTCTTGGCATTGGATCGTTTGGCAAAGTGAAAATAGCTGAACATACCCGA
ACCGGGCACAAAGTTGCTGTCAAGATTCTTAATCGCCGAAAAATCAGGAACATGGACATG
GAAGAAAAAGTGCGAAGGGAAATCAAAATATTGAGATTGTTCATGCATCCTCATATTATA
CGGCTTTATGAGGTCATAGAGACACCTTCAGATATATATGTTGTGATGGAGTATGTGAAA
TCTGGCGAGCTGTTTGATTACATTGTTGAGAAGGGCAGATTGCAGGAGGATGAAGCTCGT
AATTTTTTTCAGCAGATAATTTCTGGTGTTGAATACTGCCATAGAAACATGGTGGTTCAT
AGGGACCTTAAGCCCGAAAACCTCCTTCTGGATTCCAAATGGAATGTGAAGATAGCAGAT
TTTGGTTTGAGCAATATCATGCGTGATGGTCATTTTCTGAAGACAAGTTGTGGAAGCCCG
AATTATGCTGCCCCAGAGGTTATATCAGGAAAATTATATGCTGGCCCTGAGGTAGATGTA
TGGAGCTGTGGCGTTATTCTTTATGCTCTTCTCTGTGGCACCCTTCCATTTGACGATGAA
AACATTCCCAACCTTTTTAAGAAAATAAAGGGCGGAATATATACTCTGCCCAGCCATTTA
TCAGCTGGTGCAAGGGATTTGATTCCAAGGATGCTTATAGTTGACCCAATGAAGCGAATG
ACTATTCCTGAGATTCGCTTGCACCCTTGGTTCCAAGCTCATCTGCCACGTTATTTAGCC
GTACCTCCACCAGATACAATGCAACAAGCCAAGAAGATCGATGAAGAGATTCTTCAAGAG
GTGGTTAAGATGGGATTTGACAGGAGCAACCTTATTGAATCTCTTCGCAATAGAGTCCAA
AATGAGGGCACTGTCGCGTATTATTTGCTACTAGACAATCGCCATCGTGTTTCCACTGGC
TATCTGGGAGCTGAATTTCAGGAGTCTGTGGAATATGGCTACAATCGAAACAATTCAAAT
GAAGCTGTTACTTCCCCTGTTGGGCAACGCTTCCCAGGAATAATGGATTATCAGCAAGCT
GGTGCGAGACAGTTTCCCATCGAAAGGAAATGGGCTCTTGGACTCCAGTCTCGGGCACAT
CCACGTGAGATAATGACTGAAGTTCTGAAAGCTCTGCAAGAACTGAACGTATGTTGGAAA
AAGATTGGTCAGTATAACATGAAATGCCGATGGATTCCTAGCGTACCTGGTCATCATGAA
GGCATGGGTATTAATTCTATGCACGGGAGTCAGTTCTTTGGAGATGATTCAACCATTACT
GAGAATGATGGGATCACTAAATTAACAAATGTGGTCAAGTTTGAAGTTCAGCTTTACAAA
ACTAGAGAGGAGAAGTACCTGCTTGACCTTCAGAGGGTTCAGGGTCCACAGTTCCTCTTC
TTGGATCTCTGTGCTGCTTTTCTTGCTCAGCTTCGAGTCCTTTGA

Peptide Sequence

PEP ID

XP_016488546.1
PEP Infomation

PREDICTED: SNF1-related protein kinase catalytic subunit alpha KIN10-like [Nicotiana tabacum]
Sequence

MDGSTVQSSSSVDSFLRNYKLGKTLGIGSFGKVKIAEHTRTGHKVAVKILNRRKIRNMDM
EEKVRREIKILRLFMHPHIIRLYEVIETPSDIYVVMEYVKSGELFDYIVEKGRLQEDEAR
NFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKWNVKIADFGLSNIMRDGHFLKTSCGSP
NYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHL
SAGARDLIPRMLIVDPMKRMTIPEIRLHPWFQAHLPRYLAVPPPDTMQQAKKIDEEILQE
VVKMGFDRSNLIESLRNRVQNEGTVAYYLLLDNRHRVSTGYLGAEFQESVEYGYNRNNSN
EAVTSPVGQRFPGIMDYQQAGARQFPIERKWALGLQSRAHPREIMTEVLKALQELNVCWK
KIGQYNMKCRWIPSVPGHHEGMGINSMHGSQFFGDDSTITENDGITKLTNVVKFEVQLYK
TREEKYLLDLQRVQGPQFLFLDLCAAFLAQLRVL

Transcript Sequence

Gene sequence data has not been registered.